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Vascular SMC

Embryonic v1

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High hierarchy

Smooth muscle cells

Low hierarchy

Vascular SMC

Description

smooth muscle cells associated with the vasculature

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Curated Markers

NTRK3
GeneCards NCBI Ensembl
NTN4
GeneCards NCBI Ensembl
PLN
GeneCards NCBI Ensembl

Top Model Markers

EVX1
GeneCards NCBI Ensembl
STRA8
GeneCards NCBI Ensembl
PGM5P4-AS1
GeneCards NCBI Ensembl
SMIM28
GeneCards NCBI Ensembl
LINC02217
GeneCards NCBI Ensembl
LINC02446
GeneCards NCBI Ensembl
NPVF
GeneCards NCBI Ensembl
KIR2DL1
GeneCards NCBI Ensembl
ANXA10
GeneCards NCBI Ensembl
CYP11B1
GeneCards NCBI Ensembl

Datasets

He et al. 2022
Link

Tissues

  • Lung

Ontology CL:0000359

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About Teichmann Lab in the Cambridge Stem Cell Institute

The Teichmann Lab is based in the Cambridge Stem Cell Institute of the University of Cambridge. The Teichmann lab uses cell-atlasing and cellular genetics to map cells in the human body combining cutting-edge methodologies and computational approaches.

About CellTypist

CellTypist was first developed as a platform for exploring tissue adaptation of cell types using scRNA-seq semi-automatic annotations. Now it's an open source tool for automated cell type annotations as well as a working group in charge of curating models and ontologies.

Citation

If you use any resources or service here, please cite:

Automatic cell-type harmonization and integration across Human Cell Atlas datasets. Cell 186, 5876–5891.e20 (2023). Link

Cross-tissue immune cell analysis reveals tissue-specific features in humans. Science 376, eabl5197 (2022). Link

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Working Group
  • Simone Webb, Laura Jardine (Haniffa Lab)
  • Benjamin Stewart, Kelvin Tuong (Clatworthy Lab)
  • Regina Hoo (Vento-Tormo Lab)
  • Chuan Xu, Cecilia Domínguez Conde, Kylie James, Jongeun Park, Elo Madissoon, Waradon Sungnak, Rasa Elmentaite, Peng He (Teichmann Lab)