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Tissue-repair macrophage

Embryonic v1

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High hierarchy

Macrophage

Low hierarchy

Tissue-repair macrophage

Description

abundant tissue-repair macrophages in the developing testes

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Curated Markers

CD68
GeneCards NCBI Ensembl
F13A1
GeneCards NCBI Ensembl
CD163
GeneCards NCBI Ensembl

Top Model Markers

MTRNR2L12
GeneCards NCBI Ensembl
MTRNR2L8
GeneCards NCBI Ensembl
MUC5AC
GeneCards NCBI Ensembl
CHIA
GeneCards NCBI Ensembl
SLCO4A1-AS1
GeneCards NCBI Ensembl
C1QC
GeneCards NCBI Ensembl
STRA8
GeneCards NCBI Ensembl
NPVF
GeneCards NCBI Ensembl
ANHX
GeneCards NCBI Ensembl
LINC00305
GeneCards NCBI Ensembl

Datasets

Garcia-Alonso et al. 2022
PubMed

Tissues

  • Gonad

Ontology CL:0000235

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About Teichmann Lab in the Cambridge Stem Cell Institute

The Teichmann Lab is based in the Cambridge Stem Cell Institute of the University of Cambridge. The Teichmann lab uses cell-atlasing and cellular genetics to map cells in the human body combining cutting-edge methodologies and computational approaches.

About CellTypist

CellTypist was first developed as a platform for exploring tissue adaptation of cell types using scRNA-seq semi-automatic annotations. Now it's an open source tool for automated cell type annotations as well as a working group in charge of curating models and ontologies.

Citation

If you use any resources or service here, please cite:

Automatic cell-type harmonization and integration across Human Cell Atlas datasets. Cell 186, 5876–5891.e20 (2023). Link

Cross-tissue immune cell analysis reveals tissue-specific features in humans. Science 376, eabl5197 (2022). Link

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Working Group
  • Simone Webb, Laura Jardine (Haniffa Lab)
  • Benjamin Stewart, Kelvin Tuong (Clatworthy Lab)
  • Regina Hoo (Vento-Tormo Lab)
  • Chuan Xu, Cecilia Domínguez Conde, Kylie James, Jongeun Park, Elo Madissoon, Waradon Sungnak, Rasa Elmentaite, Peng He (Teichmann Lab)