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Oocyte

Embryonic v1

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High hierarchy

Germ cells

Low hierarchy

Oocyte

Description

female germ cells involved in reproduction

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Curated Markers

FIGLA
GeneCards NCBI Ensembl
ZP3
GeneCards NCBI Ensembl
GDF9
GeneCards NCBI Ensembl

Top Model Markers

PADI6
GeneCards NCBI Ensembl
ZP3
GeneCards NCBI Ensembl
FIGLA
GeneCards NCBI Ensembl
IGHEP1
GeneCards NCBI Ensembl
LINC02303
GeneCards NCBI Ensembl
OOSP2
GeneCards NCBI Ensembl
NPVF
GeneCards NCBI Ensembl
SLCO4A1-AS1
GeneCards NCBI Ensembl
NLRP5
GeneCards NCBI Ensembl
IGLC6
GeneCards NCBI Ensembl

Datasets

Garcia-Alonso et al. 2022
PubMed

Tissues

  • Gonad

Ontology CL:0000023

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About Teichmann Lab in the Cambridge Stem Cell Institute

The Teichmann Lab is based in the Cambridge Stem Cell Institute of the University of Cambridge. The Teichmann lab uses cell-atlasing and cellular genetics to map cells in the human body combining cutting-edge methodologies and computational approaches.

About CellTypist

CellTypist was first developed as a platform for exploring tissue adaptation of cell types using scRNA-seq semi-automatic annotations. Now it's an open source tool for automated cell type annotations as well as a working group in charge of curating models and ontologies.

Citation

If you use any resources or service here, please cite:

Automatic cell-type harmonization and integration across Human Cell Atlas datasets. Cell 186, 5876–5891.e20 (2023). Link

Cross-tissue immune cell analysis reveals tissue-specific features in humans. Science 376, eabl5197 (2022). Link

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Working Group
  • Simone Webb, Laura Jardine (Haniffa Lab)
  • Benjamin Stewart, Kelvin Tuong (Clatworthy Lab)
  • Regina Hoo (Vento-Tormo Lab)
  • Chuan Xu, Cecilia Domínguez Conde, Kylie James, Jongeun Park, Elo Madissoon, Waradon Sungnak, Rasa Elmentaite, Peng He (Teichmann Lab)